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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
total RNA-seq
25
ChIP-seq
4
DNase-seq
2
ATAC-seq
Assay category
112
Transcription
25
DNA binding
6
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
114
February, 2021
21
October, 2019
3
July, 2019
3
May, 2019
2
June, 2019
Available data
168
bam
143
bigWig
116
tsv
88
txt
82
bed narrowPeak
25
bigBed narrowPeak
6
tagAlign
4
bed bed3
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
143
Homo sapiens
Biosample type
85
tissue
56
cell line
2
primary cell
Organ
622
pancreas
621
liver
569
connective tissue
425
adipose tissue
299
epithelium
224
heart
219
brain
153
vasculature
148
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
143
AMP
Genome assembly (visualization)
143
GRCh38
143
hg19
Lab
143
AMP-T2D consortium
assay_slims!
3D chromatin structure
organ_slims!
skin of body
BIOSAMPLE
ASSAY
143 results
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Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
tissue
bone tissue
58
tibial artery
18
2
1
coronary artery
3
2
1
cell line
smooth muscle cell of the coronary artery
52
4
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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