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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
Assay category
154
DNA binding
3D chromatin structure
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
33
transcription factor
27
control
7
RNA binding protein
2
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
316
August, 2021
309
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
100
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
November, 2019
59
September, 2020
54
March, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
4
August, 2018
4
March, 2023
3
June, 2018
2
March, 2019
1
August, 2022
October, 2022
Available data
154
bam
127
bed narrowPeak
127
bigBed narrowPeak
127
bigWig
34
fastq
Organism
154
Homo sapiens
Biosample type
122
tissue
27
cell line
5
primary cell
Organ
50
blood vessel
50
vasculature
28
brain
27
blood
27
bodily fluid
21
heart
7
limb
7
musculature of body
7
spleen
5
artery
5
epithelium
5
kidney
2
pancreas
Project
154
AMP
Genome assembly (visualization)
127
hg19
126
GRCh38
Lab
154
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
1
inconsistent control
assay_slims!
3D chromatin structure
lab.title!
Mark McCarthy, Oxford
month_released!
October, 2022
BIOSAMPLE
ASSAY
154 results
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Clear Filters
ChIP-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 7 more…
cell line
GM12878
27
primary cell
kidney epithelial cell
5
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