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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 44total RNA-seq
  • 18small RNA-seq
  • 15RRBS
  • 12WGBS
  • 6ATAC-seq
  • 3single cell RNA-seq
  • 2FAIRE-seq
Assay category
  • 65Transcription
  • 27DNA methylation
  • 3D chromatin structure
  • 8DNA accessibility
Target of assay
  • 3control
Date released
  • 715February, 2021
  • 411August, 2017
  • 406November, 2017
  • 399May, 2021
  • 341May, 2020
  • 316August, 2021
  • 309October, 2019
  • 218June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 100July, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 59November, 2019
  • 59September, 2020
  • 54March, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 34December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 4August, 2018
  • 4March, 2019
  • 4March, 2023
  • 3June, 2018
  • 1August, 2022
  • 1October, 2022
Available data
  • 82bam
  • 81bigWig
  • 65tsv
  • 23bed bedMethyl
  • 23bigBed bedMethyl
  • 7bed narrowPeak
  • 2bigBed narrowPeak
Organism
  • 100Homo sapiens
Biosample type
  • 73tissue
  • 27primary cell
Organ
  • 25heart
  • 17connective tissue
  • 15brain
  • 12adipose tissue
  • 11epithelium
  • 11kidney
  • 10vasculature
  • 9blood vessel
  • 9liver
  • 6musculature of body
  • 6pancreas
  • 3artery
  • 2pericardium
  • 1eye
  • 1limb
Project
  • 100AMP
Genome assembly (visualization)
  • 87hg19
  • 79GRCh38
Lab
  • 100AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
assay_slims!
  • 3D chromatin structure
BIOSAMPLE
ASSAY

100 results

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Clear Filters
total RNA-seq
small RNA-seq
RRBS
WGBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle2142
omental fat pad41
right lobe of liver221
subcutaneous adipose tissue41
body of pancreas22
primary cell
cerebellar granule cell2
epithelial cell of proximal tubule11
kidney epithelial cell11
mesenchymal stem cell of adipose11
renal cortical epithelial cell11
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