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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
15
small RNA-seq
14
RRBS
12
WGBS
7
Hi-C
3
single cell RNA-seq
Assay category
49
Transcription
26
DNA methylation
DNA accessibility
7
3D chromatin structure
Target of assay
3
control
Date released
406
November, 2017
363
May, 2021
280
October, 2019
277
August, 2017
241
May, 2020
234
August, 2021
216
February, 2021
166
July, 2018
120
May, 2019
101
May, 2022
96
February, 2023
94
December, 2017
82
July, 2019
80
April, 2019
78
November, 2018
59
September, 2018
58
March, 2020
56
September, 2020
October, 2018
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
23
February, 2020
19
June, 2019
15
October, 2017
10
December, 2019
10
November, 2020
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
3
May, 2023
1
March, 2019
Available data
60
bigWig
58
bam
49
tsv
22
bed bedMethyl
22
bigBed bedMethyl
3
bed bed3+
3
hdf5
Organism
82
Homo sapiens
Biosample type
59
tissue
23
primary cell
Organ
21
heart
connective tissue
16
brain
13
epithelium
12
adipose tissue
10
kidney
10
liver
10
musculature of body
10
vasculature
9
blood vessel
6
pancreas
5
limb
2
artery
2
pericardium
1
eye
Project
82
AMP
Genome assembly (visualization)
66
hg19
57
GRCh38
Lab
82
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA accessibility
assay_slims!!
DNA accessibility
month_released!
October, 2018
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
82 results
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total RNA-seq
small RNA-seq
RRBS
WGBS
Hi-C
single cell RNA-seq
tissue
heart left ventricle
2
1
4
right lobe of liver
2
2
1
body of pancreas
2
2
gastrocnemius medialis
4
heart
2
1
1
+ See 22 more…
primary cell
cerebellar granule cell
2
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
skeletal muscle satellite cell
1
1
+ See 13 more…
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