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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
Hi-C
2
WGBS
1
RRBS
1
pCHi-C
Assay category
DNA binding
Transcription
DNA accessibility
5
3D chromatin structure
3
DNA methylation
Date released
5
July, 2019
3
March, 2020
1
October, 2019
Available data
3
bigWig
3
hic
2
bam
2
bed bed3+
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tsv
Organism
9
Homo sapiens
Biosample type
5
primary cell
4
tissue
Organ
85
bone element
76
pancreas
71
epithelium
17
liver
16
connective tissue
16
heart
14
kidney
13
musculature of body
9
adipose tissue
9
vasculature
8
blood vessel
7
brain
5
eye
5
limb
3
spleen
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
stomach
1
urinary bladder
Project
9
AMP
Genome assembly (visualization)
6
hg19
1
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
DNA accessibility
DNA binding
Transcription
files.file_type!
ibed
BIOSAMPLE
ASSAY
9 results
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Hi-C
WGBS
RRBS
pCHi-C
primary cell
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
endothelial cell of hepatic sinusoid
1
tissue
aorta
1
2
1
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