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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
total RNA-seq
6
single cell RNA-seq
2
WGBS
1
Hi-C
1
pCHi-C
Assay category
DNA binding
65
Transcription
DNA accessibility
2
DNA methylation
1
3D chromatin structure
Date released
52
February, 2021
6
August, 2021
5
July, 2019
3
February, 2020
3
March, 2020
Available data
66
tsv
58
bam
57
bigWig
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
69
Homo sapiens
Biosample type
52
cell line
17
tissue
primary cell
Organ
478
connective tissue
408
adipose tissue
350
pancreas
203
liver
177
heart
146
bone element
130
kidney
69
blood vessel
69
vasculature
56
artery
49
epithelium
24
brain
23
eye
19
musculature of body
15
embryo
12
limb
10
lung
5
nerve
4
skeleton
3
spleen
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
69
AMP
Genome assembly (visualization)
57
GRCh38
57
hg19
Lab
69
AMP-T2D consortium
assay_slims!
DNA accessibility
DNA binding
biosample_type!
primary cell
files.file_type!
ibed
BIOSAMPLE
ASSAY
69 results
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total RNA-seq
single cell RNA-seq
WGBS
Hi-C
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
4
2
1
1
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
coronary artery
1
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