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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
15
total RNA-seq
1
Hi-C
Assay category
24
DNA binding
15
Transcription
DNA accessibility
1
3D chromatin structure
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
660
February, 2021
406
November, 2017
385
August, 2017
364
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
100
February, 2023
94
December, 2017
80
April, 2019
76
October, 2018
73
July, 2019
71
November, 2018
60
March, 2020
60
May, 2022
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
39
bam
39
fastq
31
bigWig
16
bed narrowPeak
15
tsv
1
bedpe
1
hic
Organism
40
Homo sapiens
Biosample type
39
in vitro differentiated cells
1
tissue
Organ
13
embryo
1
pancreas
Project
40
AMP
Genome assembly (visualization)
32
hg19
31
GRCh38
Lab
39
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
inconsistent control read length
assay_slims!
DNA accessibility
DNA methylation
BIOSAMPLE
ASSAY
40 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
tissue
islet of Langerhans
1
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