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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
Assay category
94
DNA binding
DNA accessibility
Target of assay
91
histone
91
histone modification
58
broad histone mark
33
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
63
November, 2017
25
May, 2019
6
October, 2017
Available data
196
bam
175
bigWig
170
bed narrowPeak
118
tagAlign
94
bigBed narrowPeak
18
fastq
15
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
2
tsv
1
tagAlign bed3+
0
txt
Organism
94
Homo sapiens
Biosample type
88
tissue
6
primary cell
Organ
352
liver
94
brain
84
bone element
71
vasculature
69
blood vessel
64
heart
59
pancreas
54
blood
54
bodily fluid
48
limb
36
epithelium
24
kidney
24
nerve
21
artery
15
connective tissue
14
musculature of body
12
spleen
10
vein
6
adipose tissue
2
eye
Project
94
AMP
Genome assembly (visualization)
94
GRCh38
42
hg19
Lab
94
AMP-T2D consortium
Audit category:
3
missing controlled_by
assay_slims!
DNA accessibility
Transcription
BIOSAMPLE
ASSAY
94 results
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ChIP-seq
tissue
layer of hippocampus
16
temporal lobe
13
angular gyrus
12
caudate nucleus
12
middle frontal area 46
11
+ See 4 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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