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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
RNA microarray
55
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
68
Transcription
DNA accessibility
Date released
57
August, 2021
6
May, 2022
5
February, 2021
1
October, 2022
Available data
3003
bam
2819
bigWig
1581
tsv
1325
bed narrowPeak
1256
fastq
801
bigBed narrowPeak
398
tagAlign
114
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
69
txt
64
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
68
Homo sapiens
Biosample type
68
tissue
1
cell line
Organ
62
kidney
6
pancreas
4
bone element
skeleton
Project
69
AMP
Lab
57
Katalin Susztak, Upenn
6
AMP-T2D consortium
6
Kyle Gaulton, UCSD
Audit category:
5
audit script error
assay_slims!
DNA accessibility
assay_title!
RNA microarray
snDrop-seq
organ_slims!
skeleton
BIOSAMPLE
ASSAY
69 results
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total RNA-seq
single cell RNA-seq
MPRA
tissue
kidney
49
13
islet of Langerhans
6
cell line
MIN6
1
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