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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
6
total RNA-seq
4
Hi-C
1
WGBS
Assay category
43
DNA binding
DNA accessibility
6
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
31
histone
31
histone modification
20
broad histone mark
12
control
11
narrow histone mark
Date released
40
October, 2019
7
May, 2019
5
July, 2019
2
February, 2020
Available data
47
bam
35
bigWig
30
bed narrowPeak
30
bigBed narrowPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
54
Homo sapiens
Biosample type
54
tissue
Organ
773
pancreas
762
liver
649
connective tissue
482
adipose tissue
400
epithelium
316
heart
249
brain
186
kidney
178
vasculature
174
blood vessel
artery
78
limb
63
bone element
61
musculature of body
60
blood
60
bodily fluid
40
nerve
37
embryo
29
eye
23
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
54
AMP
Genome assembly (visualization)
34
GRCh38
34
hg19
Lab
54
AMP-T2D consortium
assay_slims!
DNA accessibility
assay_title!
RNA microarray
snDrop-seq
organ_slims!
artery
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
35
5
muscle of leg
7
1
gastrocnemius medialis
1
4
islet of Langerhans
1
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