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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
DNA accessibility
19
Transcription
2
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
20
October, 2019
4
February, 2023
1
February, 2020
1
July, 2019
Available data
5
tsv
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
26
Homo sapiens
Biosample type
25
tissue
1
primary cell
Organ
159
pancreas
147
heart
125
epithelium
125
kidney
89
liver
70
connective tissue
45
adipose tissue
41
brain
37
musculature of body
26
eye
16
vasculature
15
blood vessel
10
lung
8
limb
5
bone element
5
gonad
5
ovary
4
artery
4
skeleton
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
26
AMP
Genome assembly (visualization)
1
hg19
Lab
26
AMP-T2D consortium
assay_slims!
DNA accessibility
assay_title!
RNA microarray
files.file_type!
bam
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
26 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
14
4
2
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
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