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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
total RNA-seq
27
ChIP-seq
Assay category
188
Transcription
DNA accessibility
27
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
Date released
550
February, 2021
318
November, 2017
295
May, 2021
259
August, 2017
215
May, 2020
193
October, 2019
164
July, 2018
97
May, 2019
72
December, 2017
66
July, 2019
65
April, 2019
63
November, 2018
58
September, 2018
49
April, 2018
47
October, 2018
45
August, 2021
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
23
June, 2019
16
March, 2020
6
October, 2017
5
December, 2019
5
January, 2018
4
November, 2020
3
August, 2018
3
June, 2018
Available data
215
bam
215
bigWig
189
tsv
27
bed narrowPeak
27
tagAlign
Organism
215
Homo sapiens
Biosample type
170
tissue
45
primary cell
Organ
170
liver
Project
170
AMP
45
T1D
Genome assembly (visualization)
215
hg19
207
GRCh38
Lab
170
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
assay_slims!
DNA accessibility
assay_title!
WGBS
target.investigated_as!
control
BIOSAMPLE
ASSAY
215 results
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total RNA-seq
ChIP-seq
tissue
liver
143
27
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
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