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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
7
pCHi-C
5
ChIP-seq
1
RRBS
Assay category
DNA accessibility
19
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
20
October, 2019
4
February, 2023
3
June, 2019
2
March, 2020
1
February, 2020
1
July, 2019
1
May, 2021
Available data
7
tsv
3
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
32
Homo sapiens
Biosample type
27
tissue
4
primary cell
1
cell line
Organ
757
liver
722
pancreas
644
connective tissue
477
adipose tissue
354
epithelium
308
heart
249
brain
191
kidney
176
vasculature
172
blood vessel
147
bone element
92
artery
77
limb
60
blood
60
bodily fluid
60
musculature of body
40
nerve
37
embryo
29
eye
21
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
31
AMP
1
T1D
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
31
AMP-T2D consortium
1
Kyle Gaulton, UCSD
assay_slims!
DNA accessibility
assay_title!
WGBS
BIOSAMPLE
ASSAY
32 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
14
4
2
retina
3
pigmented layer of retina
2
thymus
2
primary cell
retinal pigment epithelial cell
3
1
cell line
MCF-7
1
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