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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
23
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
DNA accessibility
23
DNA binding
Target of assay
23
control
Date released
661
February, 2021
268
August, 2017
245
May, 2021
214
May, 2020
207
August, 2021
168
July, 2018
107
October, 2019
101
May, 2022
100
February, 2023
100
July, 2019
93
November, 2017
57
March, 2020
56
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
15
April, 2019
15
November, 2018
14
November, 2020
December, 2019
9
April, 2020
9
January, 2019
9
October, 2017
8
June, 2019
6
September, 2017
5
December, 2018
5
January, 2018
4
August, 2018
4
March, 2023
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
238
bam
215
bigWig
189
tsv
50
tagAlign
bed narrowPeak
Organism
214
Homo sapiens
Biosample type
166
tissue
47
primary cell
1
cell line
Organ
167
liver
Project
169
AMP
45
T1D
Genome assembly (visualization)
188
GRCh38
188
hg19
Lab
169
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
assay_slims!
DNA accessibility
assay_title!
siRNA RNA-seq
files.file_type!
bed narrowPeak
month_released!
December, 2019
BIOSAMPLE
ASSAY
214 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 22 more…
cell line
HepG2
1
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