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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
1
pCHi-C
Assay category
60
DNA binding
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
1
March, 2020
Available data
60
bam
60
fastq
54
bed narrowPeak
54
bigBed narrowPeak
54
bigWig
1
tsv
Organism
61
Homo sapiens
Biosample type
60
cell line
1
tissue
Organ
759
liver
686
pancreas
645
connective tissue
482
adipose tissue
326
epithelium
246
brain
220
heart
170
vasculature
166
blood vessel
147
bone element
127
kidney
90
artery
78
limb
60
blood
60
bodily fluid
58
musculature of body
40
nerve
37
embryo
29
eye
23
spleen
18
vein
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
61
AMP
Genome assembly (visualization)
54
GRCh38
54
hg19
Lab
61
AMP-T2D consortium
Audit category:
1
inconsistent control
1
inconsistent ontology term
assay_slims!
DNA accessibility
assay_title!
single cell RNA-seq
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
61 results
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ChIP-seq
pCHi-C
cell line
GM12878
60
tissue
bladder (urinary bladder)
1
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