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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
total RNA-seq
75
ChIP-seq
1
pCHi-C
Assay category
195
Transcription
DNA accessibility
75
DNA binding
Target of assay
34
histone
34
histone modification
30
narrow histone mark
27
control
14
transcription factor
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
268
bam
241
bigWig
194
tsv
50
tagAlign
48
bed narrowPeak
30
fastq
21
bigBed narrowPeak
Organism
271
Homo sapiens
Biosample type
200
tissue
47
primary cell
24
cell line
Organ
199
liver
18
blood
18
bodily fluid
7
spleen
Project
226
AMP
45
T1D
Genome assembly (visualization)
241
hg19
233
GRCh38
Lab
226
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
assay_slims!
DNA accessibility
assay_title!
snATAC-seq
month_released!
April, 2018
BIOSAMPLE
ASSAY
271 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
tissue
liver
143
50
spleen
7
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
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cell line
GM12878
18
HepG2
5
1
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