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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
293
ChIP-seq
174
single cell RNA-seq
135
total RNA-seq
87
RNA microarray
27
WGBS
25
pCHi-C
5
Hi-C
4
MeRIP-seq
3
snDrop-seq
2
RRBS
Assay category
293
DNA binding
Target of assay
190
histone
190
histone modification
182
control
105
broad histone mark
narrow histone mark
6
RNA binding protein
6
transcription factor
Date released
68
August, 2017
52
November, 2017
29
October, 2018
27
October, 2019
25
May, 2024
23
May, 2020
22
May, 2019
15
April, 2019
12
December, 2017
8
October, 2017
4
December, 2018
4
September, 2017
3
November, 2018
1
January, 2019
Available data
201
bam
105
tagAlign
65
fastq
61
bed narrowPeak
60
bigWig
36
bigBed narrowPeak
Organism
292
Homo sapiens
Biosample type
293
tissue
77
cell line
64
in vitro differentiated cells
29
primary cell
Organ
70
brain
57
liver
44
adipose tissue
44
connective tissue
41
heart
29
pancreas
17
limb
16
blood vessel
16
vasculature
11
nerve
8
musculature of body
8
spleen
7
artery
7
kidney
Project
293
AMP
Genome assembly (visualization)
339
GRCh38
hg19
Lab
268
AMP-T2D consortium
25
Patrick T. Ellinor, Broad
Audit category:
1
missing controlled_by
assay_slims!
DNA accessibility
assembly!
hg19
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
293 results
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Clear Filters
ChIP-seq
tissue
liver
54
left cardiac atrium
25
subcutaneous abdominal adipose tissue
25
islet of Langerhans
15
layer of hippocampus
15
+ See 39 more…
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