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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
10
total RNA-seq
3
RRBS
2
STARR-seq
2
pCHi-C
Assay category
25
DNA binding
Target of assay
10
histone
10
histone modification
9
transcription factor
7
recombinant protein
6
control
5
broad histone mark
5
narrow histone mark
2
RNA binding protein
Date released
17
October, 2019
5
May, 2019
3
June, 2019
Available data
25
bam
19
bed narrowPeak
19
bigWig
6
bigBed narrowPeak
Organism
25
Homo sapiens
Biosample type
tissue
15
primary cell
10
cell line
Organ
389
liver
129
epithelium
101
pancreas
79
connective tissue
60
blood
60
bodily fluid
29
vasculature
26
blood vessel
25
kidney
22
embryo
17
vein
11
heart
10
musculature of body
9
brain
6
artery
3
eye
Project
25
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
25
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
assay_slims!
DNA accessibility
audit.WARNING.category!
inconsistent control run_type
biosample_type!
tissue
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
primary cell
epithelial cell of proximal tubule
10
kidney epithelial cell
5
cell line
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
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