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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1871
ChIP-seq
1527
total RNA-seq
322
single cell RNA-seq
87
RNA microarray
75
WGBS
57
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
DNA sequencing
Date released
1
August, 2021
Available data
1
vcf
Organism
1
Homo sapiens
Biosample type
1
cell line
Organ
1
liver
Project
1
AMP
Lab
1
Bing Ren, UCSD
assay_slims!
DNA accessibility
assay_title!
HiChIP
month_released!
September, 2023
BIOSAMPLE
ASSAY
1 results
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whole genome sequencing assay
cell line
HepG2
1
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