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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
13
single cell RNA-seq
Assay category
72
Transcription
DNA accessibility
Date released
89
February, 2021
57
August, 2021
6
May, 2022
4
February, 2023
October, 2022
Available data
358
fastq
317
bam
186
tsv
156
txt
145
bigWig
143
tagAlign
108
bed narrowPeak
93
zippedFastqFolder
36
bed broadPeak
34
bigBed narrowPeak
19
bed bedMethyl
19
bigBed bedMethyl
17
bedpe bed3+
15
bigBed broadPeak
15
hic
10
bed bed3+
8
csv
4
hdf5
3
tar
2
ibed
1
bedpe
1
vcf
Organism
156
Homo sapiens
Biosample type
156
tissue
Organ
88
bone element
62
kidney
6
pancreas
4
skeleton
Project
156
AMP
Lab
93
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
assay_slims!
DNA accessibility
assembly!
GRCh38
month_released!
October, 2019
October, 2022
BIOSAMPLE
ASSAY
156 results
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RNA microarray
total RNA-seq
single cell RNA-seq
tissue
bone element
84
kidney
49
13
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
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