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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
47
WGBS
14
ChIP-seq
Assay category
53
Transcription
DNA accessibility
47
DNA methylation
14
DNA binding
Target of assay
14
control
Date released
41
May, 2022
37
February, 2023
16
September, 2020
12
August, 2017
6
February, 2021
2
June, 2019
Available data
71
fastq
41
zippedFastqFolder
14
bam
6
tsv
Organism
114
Homo sapiens
Biosample type
226
tissue
114
primary cell
20
cell line
1
in vitro differentiated cells
Organ
122
epithelium
112
pancreas
5
blood vessel
5
vasculature
5
vein
4
connective tissue
3
kidney
2
heart
2
musculature of body
1
bone element
1
bone marrow
1
eye
1
liver
Project
100
HPAP
14
AMP
Genome assembly (visualization)
hg19
167
GRCh38
Lab
100
Klaus Kaestner, Upenn
14
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA accessibility
assembly!
hg19
BIOSAMPLE
ASSAY
114 results
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total RNA-seq
WGBS
ChIP-seq
primary cell
pancreatic alpha cell
42
31
6
pancreatic beta cell
11
16
6
cardiac fibroblast
2
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