Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
55
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
68
Transcription
DNA accessibility
Date released
89
February, 2021
57
August, 2021
6
May, 2022
1
October, 2022
Available data
2905
bam
2738
bigWig
1579
tsv
1249
bed narrowPeak
1228
fastq
725
bigBed narrowPeak
398
tagAlign
153
txt
114
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
64
bed bed3+
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
152
Homo sapiens
Biosample type
152
tissue
1
cell line
Organ
88
bone element
62
kidney
6
pancreas
skeleton
Project
153
AMP
Lab
90
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
assay_slims!
DNA accessibility
audit.ERROR.category!
inconsistent control
organ_slims!
limb
skeleton
BIOSAMPLE
ASSAY
153 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
islet of Langerhans
6
cell line
MIN6
1
Download