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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
501
total RNA-seq
8
ChIP-seq
6
single cell RNA-seq
3
snDrop-seq
2
pCHi-C
Assay category
507
Transcription
DNA accessibility
8
DNA binding
Target of assay
5
transcription factor
3
control
Date released
520
February, 2021
406
November, 2017
400
August, 2017
291
May, 2021
262
October, 2019
237
May, 2020
234
August, 2021
162
July, 2018
117
May, 2019
98
July, 2019
90
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
59
September, 2018
49
April, 2018
47
September, 2023
44
March, 2020
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
27
May, 2022
24
February, 2020
22
February, 2023
20
November, 2019
15
October, 2017
9
April, 2020
9
June, 2019
8
December, 2019
8
November, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
2
June, 2018
1
March, 2019
1
October, 2022
Available data
510
bam
509
tsv
506
bigWig
8
tagAlign
6
csv
5
bed narrowPeak
5
txt
2
bed bed3+
Organism
520
Homo sapiens
Biosample type
453
tissue
61
cell line
4
in vitro differentiated cells
2
primary cell
Organ
450
connective tissue
386
adipose tissue
58
artery
58
blood vessel
58
bone element
58
heart
58
vasculature
8
kidney
2
liver
Project
520
AMP
HPAP
Genome assembly (visualization)
508
hg19
506
GRCh38
Lab
520
AMP-T2D consortium
Audit category:
inconsistent ontology term
5
audit script error
assay_slims!
DNA accessibility
audit.ERROR.category!
inconsistent ontology term
award.project!
HPAP
organ_slims!
esophagus
BIOSAMPLE
ASSAY
520 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
snDrop-seq
pCHi-C
tissue
adipose tissue
381
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
+ See 4 more…
cell line
smooth muscle cell of the coronary artery
52
6
iPSC derived cell line
2
HepG2
1
in vitro differentiated cells
adipocyte
4
primary cell
osteoblast
1
1
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