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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
42
single cell RNA-seq
15
ChIP-seq
Assay category
162
Transcription
15
DNA binding
DNA accessibility
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
538
February, 2021
406
November, 2017
400
August, 2017
291
May, 2021
October, 2019
237
May, 2020
234
August, 2021
162
July, 2018
117
May, 2019
101
May, 2022
98
February, 2023
98
July, 2019
90
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
45
March, 2020
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
20
November, 2019
15
October, 2017
9
April, 2020
9
June, 2019
8
December, 2019
8
November, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
2
June, 2018
1
March, 2019
Available data
166
bam
164
bigWig
158
tsv
53
fastq
14
tagAlign
6
bed narrowPeak
6
bigBed narrowPeak
3
bed broadPeak
Organism
177
Homo sapiens
Biosample type
135
tissue
42
primary cell
Organ
152
pancreas
32
epithelium
15
brain
2
connective tissue
Project
177
AMP
Genome assembly (visualization)
164
GRCh38
164
hg19
Lab
177
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
4
missing controlled_by
assay_slims!
DNA accessibility
audit.ERROR.category!
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
177 results
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total RNA-seq
single cell RNA-seq
ChIP-seq
tissue
islet of Langerhans
120
brain
15
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
4
pancreatic delta cell
4
pancreatic cell
3
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