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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
single cell RNA-seq
3
Hi-C
2
RNA microarray
Assay category
DNA accessibility
7
Transcription
3
3D chromatin structure
Date released
5
February, 2021
4
December, 2019
3
October, 2022
Available data
9
tsv
5
csv
5
txt
3
bedpe bed3+
3
cool
3
hic
Organism
12
Homo sapiens
Biosample type
7
tissue
3
primary cell
2
in vitro differentiated cells
Organ
7
kidney
5
epithelium
3
pancreas
1
blood vessel
vasculature
1
vein
Project
9
AMP
3
HPAP
Genome assembly (visualization)
3
hg19
Lab
9
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
307
inconsistent ontology term
28
inconsistent control
12
audit script error
assay_slims!
DNA accessibility
month_released!
November, 2018
organ_slims!
spinal cord
vasculature
BIOSAMPLE
ASSAY
12 results
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single cell RNA-seq
Hi-C
RNA microarray
tissue
kidney
5
kidney interstitium
1
renal glomerulus
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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