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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
Assay category
3
DNA binding
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
3
November, 2017
Available data
2783
bam
2599
bigWig
1421
tsv
1271
bed narrowPeak
1150
fastq
770
bigBed narrowPeak
387
tagAlign
157
txt
101
bed broadPeak
93
zippedFastqFolder
66
bigBed broadPeak
54
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
3
Homo sapiens
Biosample type
3
cell line
Organ
3
liver
Project
3
AMP
Genome assembly (visualization)
3
hg19
Lab
3
AMP-T2D consortium
assay_slims!
DNA accessibility
audit.WARNING.category!
inconsistent control read length
month_released!
July, 2018
organ_slims!
large intestine
BIOSAMPLE
ASSAY
3 results
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ChIP-seq
cell line
HepG2
3
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