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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
total RNA-seq
4
ChIP-seq
Assay category
41
Transcription
DNA accessibility
4
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
1
transcription factor
Date released
175
August, 2017
157
July, 2018
77
October, 2019
58
September, 2018
52
October, 2018
47
May, 2022
45
May, 2021
43
February, 2023
39
April, 2018
35
November, 2019
32
February, 2021
16
September, 2020
11
July, 2019
10
March, 2020
10
November, 2020
9
May, 2019
6
September, 2017
4
August, 2021
4
February, 2020
4
November, 2018
3
August, 2018
3
October, 2022
1
June, 2018
1
March, 2019
Available data
44
bam
43
bigWig
40
tsv
3
bed narrowPeak
3
tagAlign
Organism
45
Homo sapiens
Biosample type
37
tissue
5
cell line
3
in vitro differentiated cells
Organ
45
pancreas
10
epithelium
3
heart
2
connective tissue
2
embryo
1
bone element
1
bone marrow
1
thymus
0
limb
Project
44
AMP
1
T1D
Genome assembly (visualization)
43
GRCh38
43
hg19
Lab
44
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
assay_slims!
DNA accessibility
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
45 results
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Clear Filters
total RNA-seq
ChIP-seq
tissue
islet of Langerhans
36
pancreas
1
cell line
EndoC_BH1
4
1
in vitro differentiated cells
pancreatic PP cell
3
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