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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
Assay category
29
DNA binding
Target of assay
19
histone
19
histone modification
10
narrow histone mark
10
transcription factor
9
broad histone mark
2
chromatin remodeller
Date released
16
August, 2017
11
December, 2017
2
February, 2018
October, 2018
Available data
29
bam
29
bed narrowPeak
29
bigWig
29
fastq
10
bed bed3+
6
bigBed narrowPeak
Organism
29
Homo sapiens
Biosample type
cell line
17
in vitro differentiated cells
5
primary cell
5
tissue
2
stem cell
Organ
8
pancreas
6
connective tissue
5
epithelium
3
embryo
1
liver
Project
29
AMP
Genome assembly (visualization)
29
GRCh38
29
hg19
Lab
29
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
29
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
assay_slims!
DNA accessibility
biosample_type!
cell line
files.file_type!
vcf
month_released!
October, 2018
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
4
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
+ See 1 more…
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
tissue
pancreas
4
liver
1
stem cell
hESC
2
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