Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
Assay category
DNA accessibility
55
DNA binding
Target of assay
49
transcription factor
9
RNA binding protein
6
histone
6
histone modification
5
chromatin remodeller
4
narrow histone mark
2
broad histone mark
1
other context
1
other post-translational modification
Date released
53
November, 2017
2
August, 2017
October, 2019
Available data
2768
bam
2626
bigWig
1564
tsv
1151
bed narrowPeak
1124
fastq
743
bigBed narrowPeak
tagAlign
157
txt
112
bed broadPeak
77
bigBed broadPeak
63
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
17
bedpe bed3+
16
hic
8
csv
4
hdf5
3
tar
2
ibed
1
bedpe
1
vcf
Organism
55
Homo sapiens
Biosample type
47
cell line
8
primary cell
Organ
47
liver
6
brain
4
epithelium
4
vasculature
2
blood vessel
Project
55
AMP
Genome assembly (visualization)
55
hg19
42
GRCh38
Lab
55
AMP-T2D consortium
Audit category:
2
inconsistent control read length
assay_slims!
DNA accessibility
award.project!
HPAP
files.file_type!
tagAlign
month_released!
October, 2019
BIOSAMPLE
ASSAY
55 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
47
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
skeletal muscle myoblast
2
Download