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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
15
RRBS
4
Hi-C
4
WGBS
2
total RNA-seq
1
pCHi-C
Assay category
DNA accessibility
23
DNA binding
19
DNA methylation
4
3D chromatin structure
2
Transcription
Target of assay
23
control
Date released
192
August, 2021
138
August, 2017
116
February, 2021
101
May, 2022
90
February, 2023
88
October, 2019
72
November, 2017
56
September, 2020
50
May, 2021
47
September, 2023
42
March, 2020
29
October, 2018
26
May, 2020
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
15
April, 2019
10
November, 2020
9
April, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
May, 2023
4
November, 2019
4
October, 2022
1
August, 2018
1
March, 2019
1
September, 2018
Available data
267
bam
bigWig
209
tsv
50
tagAlign
27
bed narrowPeak
23
bed bedMethyl
23
bigBed bedMethyl
4
bed bed3+
4
hdf5
Organism
49
Homo sapiens
Biosample type
37
tissue
11
primary cell
1
cell line
Organ
26
liver
6
epithelium
5
musculature of body
4
heart
4
kidney
4
limb
2
brain
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
pericardium
Project
49
AMP
Genome assembly (visualization)
15
hg19
Lab
49
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
award.project!
T1D
files.file_type!
bigWig
BIOSAMPLE
ASSAY
49 results
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Clear Filters
ChIP-seq
RRBS
Hi-C
WGBS
total RNA-seq
pCHi-C
tissue
liver
23
gastrocnemius medialis
4
heart left ventricle
1
2
aorta
1
brain
1
+ See 5 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 6 more…
cell line
HepG2
1
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