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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
Assay category
16
DNA binding
Target of assay
483
histone modification
482
histone
334
control
298
narrow histone mark
183
broad histone mark
93
transcription factor
16
RNA binding protein
8
recombinant protein
5
nucleotide modification
2
chromatin remodeller
Date released
6
August, 2017
May, 2021
5
May, 2024
2
November, 2017
1
April, 2019
1
August, 2021
1
November, 2019
Available data
106
bigWig
105
bed narrowPeak
103
bam
bigBed narrowPeak
89
fastq
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
16
Homo sapiens
Biosample type
8
tissue
4
cell line
4
in vitro differentiated cells
Organ
5
heart
4
connective tissue
3
liver
3
pancreas
1
epithelium
1
kidney
Project
16
AMP
Genome assembly (visualization)
12
GRCh38
8
hg19
Lab
10
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
1
missing controlled_by
assay_slims!
DNA accessibility
files.file_type!
bigBed narrowPeak
month_released!
May, 2021
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
tissue
left cardiac atrium
5
islet of Langerhans
2
kidney
1
cell line
HepG2
3
EndoC_BH1
1
in vitro differentiated cells
adipocyte
4
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