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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
pCHi-C
7
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
DNA accessibility
7
Transcription
Date released
17
May, 2021
10
February, 2023
2
March, 2020
Available data
bam
186
bigWig
98
tsv
88
bed narrowPeak
84
tagAlign
Organism
29
Homo sapiens
Biosample type
16
primary cell
8
tissue
5
cell line
Organ
7
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
777
AMP
227
HPAP
47
KPMP
29
T1D
9
LungMap
4
community
1
ITG
Lab
27
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA accessibility
files.file_type!
bam
ibed
BIOSAMPLE
ASSAY
29 results
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pCHi-C
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
primary cell
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
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tissue
islet of Langerhans
7
thymus
1
cell line
EndoC_BH1
3
2
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