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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ChIP-seq
5
total RNA-seq
4
small RNA-seq
Assay category
81
DNA binding
DNA accessibility
9
Transcription
Target of assay
81
histone
81
histone modification
56
narrow histone mark
25
broad histone mark
Date released
45
October, 2019
25
May, 2019
12
November, 2017
8
July, 2019
Available data
196
bam
172
bigWig
164
bed narrowPeak
tagAlign
88
bigBed narrowPeak
23
tsv
9
bed broadPeak
9
fastq
1
bed bedMethyl
1
bigBed bedMethyl
1
tagAlign bed3+
Organism
90
Homo sapiens
Biosample type
90
tissue
primary cell
Organ
548
liver
526
connective tissue
416
adipose tissue
398
pancreas
179
heart
114
blood vessel
114
vasculature
90
brain
73
artery
65
epithelium
58
bone element
54
blood
54
bodily fluid
53
limb
33
kidney
29
embryo
28
nerve
14
spleen
11
musculature of body
Project
90
AMP
Genome assembly (visualization)
90
GRCh38
78
hg19
Lab
90
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
biosample_type!
primary cell
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
90 results
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ChIP-seq
total RNA-seq
small RNA-seq
tissue
temporal lobe
13
1
1
angular gyrus
12
brain
5
1
layer of hippocampus
6
middle frontal area 46
5
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