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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
1
RRBS
Assay category
120
DNA binding
DNA accessibility
1
DNA methylation
Target of assay
75
histone
75
histone modification
38
narrow histone mark
36
broad histone mark
24
transcription factor
21
control
6
RNA binding protein
3
chromatin remodeller
Date released
325
May, 2021
324
November, 2017
129
February, 2021
121
August, 2017
86
February, 2023
78
August, 2021
74
May, 2022
62
November, 2018
59
October, 2019
59
September, 2018
56
September, 2020
48
July, 2018
48
May, 2020
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
31
June, 2019
28
December, 2018
23
January, 2019
22
March, 2020
November, 2019
10
November, 2020
7
December, 2019
5
January, 2018
5
March, 2023
5
May, 2019
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
107
fastq
106
bam
88
bigWig
70
bed narrowPeak
26
tagAlign
14
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
7
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
121
Homo sapiens
Biosample type
tissue
67
in vitro differentiated cells
54
primary cell
Organ
67
connective tissue
38
pancreas
26
epithelium
Project
121
AMP
Genome assembly (visualization)
90
hg19
87
GRCh38
Lab
121
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
assay_slims!
DNA accessibility
biosample_type!
tissue
month_released!
November, 2019
BIOSAMPLE
ASSAY
121 results
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Clear Filters
ChIP-seq
RRBS
in vitro differentiated cells
adipocyte
67
primary cell
skeletal muscle myoblast
15
1
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
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