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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
Assay category
20
DNA binding
Target of assay
309
transcription factor
89
recombinant protein
75
control
54
RNA binding protein
27
histone
27
histone modification
20
chromatin remodeller
14
narrow histone mark
13
broad histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
15
November, 2017
5
November, 2018
Available data
20
bam
20
bed narrowPeak
20
bigBed narrowPeak
20
bigWig
20
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
20
Homo sapiens
Biosample type
20
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
20
liver
10
blood
bodily fluid
Project
20
AMP
Genome assembly (visualization)
20
hg19
18
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
11
inconsistent control read length
8
inconsistent control run_type
assay_slims!
DNA accessibility
month_released!
November, 2019
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
cell line
HepG2
20
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