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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
33
single cell RNA-seq
23
ChIP-seq
Assay category
DNA accessibility
41
DNA methylation
33
Transcription
23
DNA binding
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
control
4
RNA binding protein
4
transcription factor
Date released
190
May, 2021
76
February, 2023
74
May, 2022
59
September, 2018
56
September, 2020
48
July, 2018
47
May, 2020
43
April, 2018
41
August, 2017
28
July, 2019
24
October, 2019
23
June, 2019
20
February, 2021
6
November, 2017
5
December, 2019
4
May, 2019
4
November, 2020
3
August, 2018
3
August, 2021
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
74
zippedFastqFolder
23
bam
23
bed narrowPeak
23
bigBed narrowPeak
23
bigWig
Organism
97
Homo sapiens
Biosample type
97
primary cell
27
tissue
Organ
45
epithelium
41
pancreas
9
connective tissue
8
musculature of body
3
heart
2
eye
2
kidney
Project
74
HPAP
23
AMP
Genome assembly (visualization)
23
GRCh38
23
hg19
Lab
74
Klaus Kaestner, Upenn
23
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
assay_slims!
DNA accessibility
target.investigated_as!
control
BIOSAMPLE
ASSAY
97 results
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WGBS
single cell RNA-seq
ChIP-seq
primary cell
Langerhans cell
33
pancreatic alpha cell
25
pancreatic beta cell
16
skeletal muscle satellite cell
7
mesenchymal stem cell
6
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