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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
149
total RNA-seq
53
ChIP-seq
3
small RNA-seq
Assay category
152
Transcription
53
DNA binding
DNA accessibility
Target of assay
45
histone modification
44
histone
34
narrow histone mark
10
broad histone mark
8
transcription factor
Date released
170
May, 2020
December, 2017
17
August, 2017
7
July, 2019
6
October, 2019
4
November, 2018
1
March, 2020
Available data
236
bam
205
bigWig
154
tsv
70
tagAlign
53
bed narrowPeak
31
fastq
9
bigBed narrowPeak
3
bed bed3+
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
csv
1
hic
Organism
205
Homo sapiens
Biosample type
332
cell line
205
tissue
9
primary cell
Organ
475
connective tissue
417
adipose tissue
357
pancreas
205
liver
172
brain
126
heart
62
blood vessel
62
vasculature
58
bone element
53
limb
28
nerve
24
musculature of body
22
kidney
21
artery
14
spleen
1
pituitary gland
Project
205
AMP
Genome assembly (visualization)
205
hg19
197
GRCh38
Lab
205
AMP-T2D consortium
Audit category:
1
inconsistent control read length
assay_slims!
DNA accessibility
month_released!
December, 2017
BIOSAMPLE
ASSAY
205 results
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total RNA-seq
ChIP-seq
small RNA-seq
tissue
liver
147
53
1
right lobe of liver
2
2
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