Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
pCHi-C
9
total RNA-seq
8
Hi-C
2
ChIP-seq
Assay category
9
Transcription
8
3D chromatin structure
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
537
February, 2021
279
August, 2017
222
October, 2019
193
May, 2020
159
August, 2021
120
July, 2018
115
May, 2019
82
November, 2017
80
April, 2019
74
October, 2018
69
July, 2019
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
38
March, 2020
27
May, 2022
25
February, 2020
20
November, 2019
16
November, 2018
15
October, 2017
14
February, 2023
9
April, 2020
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
4
May, 2023
4
November, 2020
3
December, 2019
1
March, 2019
Available data
27
tsv
9
bam
9
bigWig
8
hic
7
bedpe bed3+
2
bed narrowPeak
1
bedpe
Organism
39
Homo sapiens
Biosample type
39
tissue
9
cell line
8
in vitro differentiated cells
4
stem cell
1
primary cell
Organ
8
pancreas
7
heart
5
musculature of body
3
blood vessel
3
liver
3
vasculature
2
brain
2
intestine
1
adipose tissue
1
adrenal gland
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
35
AMP
4
T1D
Genome assembly (visualization)
17
hg19
9
GRCh38
Lab
38
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
39 results
search-icon
table-tab-icon
Clear Filters
pCHi-C
total RNA-seq
Hi-C
ChIP-seq
tissue
islet of Langerhans
2
1
2
psoas muscle
1
2
2
aorta
1
1
1
heart left ventricle
1
1
1
heart right ventricle
1
1
1
+ See 16 more…
See all biosamples
Download