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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
16
small RNA-seq
12
WGBS
7
ChIP-seq
6
RRBS
4
Hi-C
Assay category
47
Transcription
18
DNA methylation
DNA accessibility
7
DNA binding
4
3D chromatin structure
Target of assay
4
control
3
transcription factor
Date released
537
February, 2021
279
August, 2017
222
October, 2019
193
May, 2020
159
August, 2021
120
July, 2018
115
May, 2019
82
November, 2017
80
April, 2019
74
October, 2018
69
July, 2019
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
38
March, 2020
27
May, 2022
25
February, 2020
20
November, 2019
16
November, 2018
15
October, 2017
14
February, 2023
9
April, 2020
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
4
May, 2023
4
November, 2020
3
December, 2019
1
March, 2019
Available data
63
bam
58
bigWig
47
tsv
14
bed bedMethyl
14
bigBed bedMethyl
7
fastq
3
bed narrowPeak
3
bigBed narrowPeak
Organism
76
Homo sapiens
Biosample type
76
tissue
31
primary cell
28
cell line
Organ
16
heart
10
adipose tissue
10
connective tissue
9
brain
8
liver
7
musculature of body
7
spleen
6
pancreas
5
blood vessel
5
limb
5
vasculature
3
kidney
1
pericardium
Project
76
AMP
Genome assembly (visualization)
58
GRCh38
56
hg19
Lab
76
AMP-T2D consortium
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
76 results
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total RNA-seq
small RNA-seq
WGBS
ChIP-seq
RRBS
Hi-C
tissue
heart left ventricle
2
4
1
spleen
7
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
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