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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
15
ChIP-seq
1
pCHi-C
Assay category
39
Transcription
15
DNA binding
DNA accessibility
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
537
February, 2021
279
August, 2017
222
October, 2019
193
May, 2020
159
August, 2021
120
July, 2018
115
May, 2019
82
November, 2017
80
April, 2019
74
October, 2018
69
July, 2019
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
38
March, 2020
27
May, 2022
25
February, 2020
20
November, 2019
16
November, 2018
15
October, 2017
February, 2023
9
April, 2020
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
4
May, 2023
4
November, 2020
3
December, 2019
1
March, 2019
Available data
46
bam
44
bigWig
38
tsv
14
tagAlign
9
fastq
6
bed narrowPeak
6
bigBed narrowPeak
3
bed broadPeak
Organism
55
Homo sapiens
Biosample type
193
primary cell
127
in vitro differentiated cells
55
tissue
5
cell line
Organ
37
pancreas
15
brain
2
heart
1
thymus
Project
54
AMP
1
T1D
Genome assembly (visualization)
44
GRCh38
44
hg19
Lab
53
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Audit category:
4
missing controlled_by
assay_slims!
DNA accessibility
month_released!
February, 2023
BIOSAMPLE
ASSAY
55 results
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total RNA-seq
ChIP-seq
pCHi-C
tissue
islet of Langerhans
36
brain
15
cardiac atrium
1
cardiac ventricle
1
pancreas
1
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