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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
single cell RNA-seq
3
total RNA-seq
1
Hi-C
1
pCHi-C
Assay category
DNA accessibility
9
Transcription
1
3D chromatin structure
Date released
6
August, 2021
3
February, 2020
2
March, 2020
Available data
bam
119
bigWig
67
tsv
61
bed narrowPeak
57
bigBed narrowPeak
6
tagAlign
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
11
Homo sapiens
Biosample type
11
tissue
Organ
155
pancreas
147
heart
127
kidney
epithelium
89
bone element
89
liver
71
connective tissue
46
adipose tissue
41
brain
37
musculature of body
26
eye
16
vasculature
15
blood vessel
10
lung
8
limb
5
gonad
5
ovary
4
artery
4
skeleton
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
11
AMP
Genome assembly (visualization)
1
hg19
Lab
11
AMP-T2D consortium
assay_slims!
DNA accessibility
files.file_type!
bam
month_released!
July, 2018
organ_slims!
epithelium
BIOSAMPLE
ASSAY
11 results
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single cell RNA-seq
total RNA-seq
Hi-C
pCHi-C
tissue
aorta
4
1
1
pulmonary artery
2
ascending aorta
1
coronary artery
1
tibial artery
1
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