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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
ChIP-seq
Assay category
109
DNA binding
Target of assay
336
transcription factor
115
histone modification
114
histone
109
control
82
recombinant protein
64
narrow histone mark
58
RNA binding protein
50
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
56
November, 2017
23
May, 2020
13
December, 2017
10
August, 2017
5
August, 2021
2
October, 2019
Available data
103
bam
77
fastq
28
tagAlign
13
bigWig
bed bed3+
Organism
109
Homo sapiens
Biosample type
60
cell line
45
tissue
3
primary cell
1
in vitro differentiated cells
Organ
107
liver
51
pancreas
34
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
6
blood
6
bodily fluid
6
embryo
6
musculature of body
2
vein
1
eye
Project
109
AMP
Genome assembly (visualization)
13
hg19
Lab
105
AMP-T2D consortium
4
Bing Ren, UCSD
assay_slims!
DNA accessibility
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
109 results
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ChIP-seq
cell line
HepG2
60
tissue
liver
42
right lobe of liver
3
primary cell
endothelial cell of umbilical vein
2
hepatocyte
1
in vitro differentiated cells
hepatocyte
1
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