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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
34
ChIP-seq
2
single cell RNA-seq
Assay category
56
Transcription
DNA accessibility
34
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
58
February, 2021
23
October, 2019
5
May, 2019
2
August, 2021
February, 2020
2
July, 2019
Available data
88
bam
79
bigWig
56
tsv
25
bed narrowPeak
21
bigBed narrowPeak
6
tagAlign
Organism
90
Homo sapiens
Biosample type
58
cell line
30
tissue
2
primary cell
Organ
765
pancreas
759
liver
647
connective tissue
480
adipose tissue
396
epithelium
310
heart
237
brain
191
kidney
173
vasculature
169
blood vessel
147
bone element
90
artery
75
limb
60
blood
60
bodily fluid
57
musculature of body
39
nerve
37
embryo
28
eye
spleen
18
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
stomach
1
urinary bladder
Project
90
AMP
Genome assembly (visualization)
79
GRCh38
79
hg19
Lab
90
AMP-T2D consortium
assay_slims!
DNA accessibility
files.file_type!
bedpe bed3+
month_released!
February, 2020
organ_slims!
spleen
BIOSAMPLE
ASSAY
90 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
tibial artery
23
coronary artery
5
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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