Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
14
total RNA-seq
4
pCHi-C
Assay category
66
DNA binding
DNA accessibility
14
Transcription
Target of assay
39
control
27
histone
27
histone modification
24
narrow histone mark
3
broad histone mark
Date released
190
August, 2021
138
August, 2017
116
February, 2021
101
May, 2022
100
February, 2023
84
October, 2019
72
November, 2017
67
May, 2021
56
September, 2020
47
September, 2023
34
March, 2020
29
October, 2018
26
May, 2020
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
15
April, 2019
10
November, 2020
9
April, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
May, 2023
2
November, 2019
1
August, 2018
1
October, 2022
1
September, 2018
Available data
235
bam
bigWig
174
bed narrowPeak
58
bigBed narrowPeak
49
tagAlign
16
tsv
hic
3
bedpe bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bed bed3+
1
hdf5
1
tagAlign bed3+
Organism
84
Homo sapiens
Biosample type
68
tissue
10
cell line
6
primary cell
Organ
20
eye
17
limb
11
nerve
10
blood vessel
10
vasculature
9
brain
7
pancreas
6
epithelium
6
kidney
5
artery
5
vein
4
gonad
4
ovary
1
connective tissue
1
lymph node
Project
84
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
84
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assay_slims!
DNA accessibility
files.file_type!
bigWig
hic
BIOSAMPLE
ASSAY
84 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
tissue
islet of Langerhans
21
14
4
tibial nerve
11
tibial artery
5
kidney
2
central medial thalamic nucleus
1
+ See 10 more…
cell line
Panc1
7
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
primary cell
endothelial cell of umbilical vein
5
epithelial cell of proximal tubule
1
See all biosamples
Download