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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
single cell RNA-seq
6
WGBS
3
ChIP-seq
3
snDrop-seq
2
pCHi-C
Assay category
DNA accessibility
13
Transcription
6
DNA methylation
3
DNA binding
Target of assay
3
control
Date released
138
August, 2017
August, 2021
96
February, 2023
95
May, 2022
88
October, 2019
72
November, 2017
67
May, 2021
56
September, 2020
47
September, 2023
44
March, 2020
29
October, 2018
27
February, 2021
26
May, 2020
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
15
April, 2019
10
November, 2020
9
April, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
May, 2023
4
November, 2019
3
October, 2022
1
August, 2018
1
March, 2019
1
September, 2018
Available data
559
tsv
554
bam
bigWig
txt
18
fastq
8
tagAlign
6
csv
5
bed narrowPeak
2
bed bed3+
Organism
27
Homo sapiens
Biosample type
19
primary cell
4
cell line
4
tissue
Organ
6
epithelium
6
pancreas
3
kidney
2
artery
2
blood vessel
2
heart
2
liver
2
vasculature
1
connective tissue
Project
18
HPAP
9
AMP
Genome assembly (visualization)
2
hg19
Lab
18
Klaus Kaestner, Upenn
9
AMP-T2D consortium
assay_slims!
DNA accessibility
files.file_type!
bigWig
txt
month_released!
August, 2021
BIOSAMPLE
ASSAY
27 results
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Clear Filters
single cell RNA-seq
WGBS
ChIP-seq
snDrop-seq
pCHi-C
primary cell
Langerhans cell
12
pancreatic alpha cell
6
osteoblast
1
cell line
smooth muscle cell of the coronary artery
2
HepG2
1
iPSC derived cell line
1
tissue
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
liver
1
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