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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
Assay category
102
DNA binding
Target of assay
93
histone
93
histone modification
49
narrow histone mark
44
broad histone mark
30
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
21
October, 2019
21
September, 2018
16
December, 2017
14
August, 2017
11
November, 2019
4
June, 2019
4
May, 2019
4
November, 2017
3
August, 2021
3
May, 2021
1
March, 2020
Available data
102
bam
99
bigWig
97
bed narrowPeak
55
fastq
36
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
5
tagAlign
3
bed bed3+
Organism
102
Homo sapiens
Biosample type
71
primary cell
18
in vitro differentiated cells
13
cell line
Organ
441
liver
190
brain
170
pancreas
118
connective tissue
114
heart
102
epithelium
80
vasculature
78
blood vessel
52
blood
52
bodily fluid
49
adipose tissue
49
limb
40
kidney
33
musculature of body
25
artery
24
nerve
15
embryo
15
vein
12
spleen
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
100
AMP
2
T1D
Genome assembly (visualization)
99
hg19
97
GRCh38
Lab
102
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
assay_slims!
DNA accessibility
files.file_type!
csv
BIOSAMPLE
ASSAY
102 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
15
pancreatic ductal cell
13
epithelial cell of proximal tubule
8
pancreatic acinar cell
8
pancreatic alpha cell
7
+ See 6 more…
in vitro differentiated cells
hepatocyte
14
Hepatic endoderm
2
pancreatic PP cell
2
cell line
EndoC_BH1
13
See all biosamples
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