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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
single cell RNA-seq
3
Hi-C
Assay category
18
Transcription
3
3D chromatin structure
Date released
May, 2022
18
September, 2020
3
October, 2022
Available data
fastq
19
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
21
Homo sapiens
Biosample type
21
primary cell
Organ
3
epithelium
3
pancreas
Project
21
HPAP
Genome assembly (visualization)
3
hg19
Lab
2231
AMP-T2D consortium
285
Kyle Gaulton, UCSD
61
Katalin Susztak, Upenn
47
KPMP
40
Patrick T. Ellinor, Broad
37
Bing Ren, UCSD
21
Klaus Kaestner, Upenn
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
2
Struan F.A. Grant, CHOP
1
ITG
Audit category:
3
audit script error
assay_slims!
DNA accessibility
files.file_type!
fastq
month_released!
April, 2020
May, 2022
BIOSAMPLE
ASSAY
21 results
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single cell RNA-seq
Hi-C
primary cell
Langerhans cell
18
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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