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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
DNA accessibility
18
Transcription
Date released
648
February, 2021
365
May, 2021
281
October, 2019
May, 2020
237
August, 2021
122
August, 2017
120
May, 2019
118
July, 2018
100
July, 2019
95
May, 2022
82
November, 2017
80
April, 2019
59
March, 2020
47
September, 2023
40
May, 2024
35
November, 2019
31
June, 2019
25
February, 2020
24
February, 2023
18
September, 2020
16
October, 2018
14
November, 2020
10
December, 2019
9
April, 2020
6
October, 2017
5
April, 2018
5
March, 2023
4
May, 2023
4
October, 2022
1
March, 2019
Available data
fastq
4
tsv
4
txt
Organism
23
Homo sapiens
Biosample type
14
tissue
6
cell line
4
in vitro differentiated cells
Organ
6
pancreas
4
bone element
4
connective tissue
4
eye
4
skeleton
3
epithelium
1
heart
Project
14
AMP
10
T1D
Lab
14
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
files.file_type!
fastq
month_released!
May, 2020
organ_slims!
adrenal gland
BIOSAMPLE
ASSAY
24 results
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Clear Filters
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
tissue
islet of Langerhans
5
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
heart
1
+ See 3 more…
cell line
EndoC_BH1
3
2
1
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
See all biosamples
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