Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
total RNA-seq
11
single cell RNA-seq
2
Capture-C
1
Hi-C
Assay category
DNA accessibility
60
Transcription
1
3D chromatin structure
Date released
60
August, 2021
3
May, 2023
Available data
57
txt
2
bed bed3+
1
hic
Organism
63
Homo sapiens
Biosample type
61
tissue
2
in vitro differentiated cells
Organ
61
kidney
2
connective tissue
Project
63
AMP
Genome assembly (visualization)
3
hg19
Lab
3348
AMP-T2D consortium
291
Kyle Gaulton, UCSD
227
Klaus Kaestner, Upenn
61
Katalin Susztak, Upenn
47
KPMP
40
Patrick T. Ellinor, Broad
37
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
9
Xin Sun, UCSD
4
Anna Gloyn, Oxford
2
Struan F.A. Grant, CHOP
1
ITG
assay_slims!
DNA accessibility
files.file_type!
ibed
BIOSAMPLE
ASSAY
63 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
Capture-C
Hi-C
tissue
kidney
49
11
1
in vitro differentiated cells
adipocyte
1
osteoblast
1
Download