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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
193
total RNA-seq
75
ChIP-seq
Assay category
193
Transcription
75
DNA binding
DNA accessibility
Target of assay
34
histone
34
histone modification
30
narrow histone mark
27
control
14
transcription factor
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
Date released
554
February, 2021
392
November, 2017
272
August, 2017
264
May, 2021
238
May, 2020
235
October, 2019
164
July, 2018
120
May, 2019
94
December, 2017
79
April, 2019
77
November, 2018
76
October, 2018
74
July, 2019
58
September, 2018
49
April, 2018
39
August, 2021
39
February, 2018
34
December, 2018
33
November, 2019
31
June, 2019
30
January, 2019
16
March, 2020
8
October, 2017
6
May, 2022
6
September, 2017
5
December, 2019
4
November, 2020
3
August, 2018
3
June, 2018
Available data
268
bam
241
bigWig
194
tsv
50
tagAlign
48
bed narrowPeak
30
fastq
21
bigBed narrowPeak
Organism
268
Homo sapiens
Biosample type
200
tissue
45
primary cell
23
cell line
Organ
198
liver
18
blood
18
bodily fluid
7
spleen
Project
223
AMP
45
T1D
Genome assembly (visualization)
241
hg19
233
GRCh38
Lab
223
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
assay_slims!
DNA accessibility
files.file_type!
vcf
BIOSAMPLE
ASSAY
268 results
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Clear Filters
total RNA-seq
ChIP-seq
tissue
liver
143
50
spleen
7
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 20 more…
cell line
GM12878
18
HepG2
5
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